If you're doing this for the first time, I recommend reading the main document.
Download the entire decoy set as a single tar and gzipped file.
Name of set | Number of proteins | Average number of decoys per set (~) | Reference |
---|---|---|---|
4state_reduced |
7 | 665 | [Park & Levitt, 1996] |
fisa |
6 | 1432 | [Simons et al, 1997] |
fisa_casp3 |
6 | 1432 | [Simons et al, 1997] |
hg_structal |
29 | 29 | [Samudrala et al, 1998c] |
ig_structal |
61 | 60 | [Samudrala et al, 1998c] |
ig_structal_hires |
20 | 19 | [Samudrala et al, 1998c] |
lattice_ssfit |
8 | 2000 | [Samudrala et al, 1999,Xia et al, 2000] |
lmds |
11 | 439 | [Keasar & Levitt, 1999] |
semfold |
6 | 12900 | [Samudrala & Levitt, 2002] |
vhp_mcmd |
1 | 6255 | [Fogolari et al, 2005] |
Name of set | Number of proteins/decoys | Reference |
---|---|---|
misfold |
26 | [Holm & Sander, 1992] |
pdb_error |
3 | [Branden & Jones, 1990] |
Name of set | Number of sets | Average number of loops per set (~) | Reference |
---|---|---|---|
abm_database |
4 | 200 | [Samudrala & Moult, 1998b] |