Download and browse decoys

If you're doing this for the first time, I recommend reading the main document.

Download the entire decoy set as a single tar and gzipped file.


Multiple decoy sets

Name of set Number of proteins Average number of decoys per set (~) Reference
4state_reduced 7 665 [Park & Levitt, 1996]
fisa 6 1432 [Simons et al, 1997]
fisa_casp3 6 1432 [Simons et al, 1997]
hg_structal 29 29 [Samudrala et al, 1998c]
ig_structal 61 60 [Samudrala et al, 1998c]
ig_structal_hires 20 19 [Samudrala et al, 1998c]
lattice_ssfit 8 2000 [Samudrala et al, 1999,Xia et al, 2000]
lmds 11 439 [Keasar & Levitt, 1999]
semfold 6 12900 [Samudrala & Levitt, 2002]
vhp_mcmd 1 6255 [Fogolari et al, 2005]


Single decoy sets

Name of set Number of proteins/decoys Reference
misfold 26 [Holm & Sander, 1992]
pdb_error 3 [Branden & Jones, 1990]


Loop decoy sets

Name of set Number of sets Average number of loops per set (~) Reference
abm_database 4 200 [Samudrala & Moult, 1998b]


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