chemaxon.checkers.runner
Class CheckerRunnerImpl

java.lang.Object
  chemaxon.checkers.runner.CheckerRunnerImpl

All Implemented Interfaces:

CheckerRunner

Deprecated. This class is deprecated and not used anymore. Please use BasicCheckerRunner instead. This class will be removed in version 6.0

@Deprecated
public class CheckerRunnerImpl
extends java.lang.Object
implements CheckerRunner

The default implementation of CheckerRunner interface.

Since:

Marvin 5.3

Version:

5.7

Author:

Attila Szabo

Constructor Summary

CheckerRunnerImpl(ConfigurationReader configurationReader)
Deprecated. Initiate a CheckerRunnerImpl instance which will can execute StructureChecker instances read from configurationReader

Method Summary

void	addPropertyChangeListener(java.beans.PropertyChangeListener changeListener) Deprecated. Adds a PropertyChangeListener that will receive all the PropertyChangeEvent fired by this class
void	addPropertyChangeListener(java.lang.String propertyName, java.beans.PropertyChangeListener listener) Deprecated. Adds a PropertyChangeListener that will receive the PropertyChangeEvent fired when the property with the given name is changed
void	cancel() Deprecated. Stops the background thread
void	check() Deprecated. Invoke a background thread which will run all checkers on the given molecule
java.util.List<StructureCheckerResult>	checkAndWait() Deprecated. Execute all the checker instances on the given molecule and return a List of StructureCheckerResult which contains all the identified problems
boolean	fix() Deprecated. Runs all StructureChecker on the given molecule and after that fixes all identified problems with the first StructureFixer which is associated with the current problem.
boolean	fix(StructureCheckerResult result) Deprecated. Fixes the problem identified by result with the first StructureFixer which is associated with the StructureCheckerErrorType of the result.
java.util.List<StructureChecker>	getCheckerConfiguration() Deprecated. Gets the list of available checkers
int	getCurrent() Deprecated.
java.lang.String	getCurrentCheckerName() Deprecated.
java.util.List<StructureFixer>	getFixers(StructureCheckerResult result) Deprecated. Returns all the StructureFixer instances which associated with the StructureCheckerErrorType of the result
int	getProgessLength() Deprecated.
java.util.List<StructureCheckerResult>	getResultList() Deprecated.
boolean	isChecking() Deprecated. This function identifies the state of the checker thread
void	setConfigurationReader(ConfigurationReader reader) Deprecated. Sets a new configuration for the Runner.
void	setIgnoreConfigurationErrors(boolean ignore) Deprecated. Sets whether configuration errors should be ignored on execution.
void	setMolecule(Molecule molecule) Deprecated. Sets the molecule to be checked by the checkers

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CheckerRunnerImpl

public CheckerRunnerImpl(ConfigurationReader configurationReader)

Deprecated.

Initiate a CheckerRunnerImpl instance which will can execute StructureChecker instances read from configurationReader

Parameters:

configurationReader - a ConfigurationReader instance

Method Detail

setConfigurationReader

public void setConfigurationReader(ConfigurationReader reader)

Deprecated.

Description copied from interface: CheckerRunner

Sets a new configuration for the Runner.

Specified by:

setConfigurationReader in interface CheckerRunner

Parameters:

reader - is the ConfigurationReader instance which provides the current configuraiton

check

public void check()

Deprecated.

Description copied from interface: CheckerRunner

Invoke a background thread which will run all checkers on the given molecule

Specified by:

check in interface CheckerRunner

checkAndWait

public java.util.List<StructureCheckerResult> checkAndWait()

Deprecated.

Description copied from interface: CheckerRunner

Execute all the checker instances on the given molecule and return a List of StructureCheckerResult which contains all the identified problems

Specified by:

checkAndWait in interface CheckerRunner

Returns:

a List of StructureCheckerResult which contains all the identified problem about the given molecule

cancel

public void cancel()

Deprecated.

Description copied from interface: CheckerRunner

Stops the background thread

Specified by:

cancel in interface CheckerRunner

isChecking

public boolean isChecking()

Deprecated.

Description copied from interface: CheckerRunner

This function identifies the state of the checker thread

Specified by:

isChecking in interface CheckerRunner

Returns:

true if the background thread runs false otherwise

getCurrent

public int getCurrent()

Deprecated.

Specified by:

getCurrent in interface CheckerRunner

Returns:

the current progress percent

getCurrentCheckerName

public java.lang.String getCurrentCheckerName()

Deprecated.

Specified by:

getCurrentCheckerName in interface CheckerRunner

Returns:

which StructureChecker instance run currently

getProgessLength

public int getProgessLength()

Deprecated.

Specified by:

getProgessLength in interface CheckerRunner

Returns:

the length of the checking process

getResultList

public java.util.List<StructureCheckerResult> getResultList()

Deprecated.

Specified by:

getResultList in interface CheckerRunner

Returns:

a List of StructureCheckerResult which contains all the dentified problem about the given molecule

getFixers

public java.util.List<StructureFixer> getFixers(StructureCheckerResult result)

Deprecated.

Description copied from interface: CheckerRunner

Returns all the StructureFixer instances which associated with the StructureCheckerErrorType of the result

Specified by:

getFixers in interface CheckerRunner

Parameters:

result - a StructureCheckerResult instance which identifies the current problem

Returns:

a List of StructureFixer

fix

public boolean fix()

Deprecated.

Description copied from interface: CheckerRunner

Runs all StructureChecker on the given molecule and after that fixes all identified problems with the first StructureFixer which is associated with the current problem.

Specified by:

fix in interface CheckerRunner

Returns:

true if the fix ended correctly false otherwise

fix

public boolean fix(StructureCheckerResult result)

Deprecated.

Description copied from interface: CheckerRunner

Fixes the problem identified by result with the first StructureFixer which is associated with the StructureCheckerErrorType of the result.

Specified by:

fix in interface CheckerRunner

Parameters:

result - a StructureCheckerResult instance which identifies the problem

Returns:

true if the fix ended correctly false otherwise

setMolecule

public void setMolecule(Molecule molecule)

Deprecated.

Description copied from interface: CheckerRunner

Sets the molecule to be checked by the checkers

Specified by:

setMolecule in interface CheckerRunner

Parameters:

molecule - a Molecule instance to be checked

addPropertyChangeListener

public void addPropertyChangeListener(java.beans.PropertyChangeListener changeListener)

Deprecated.

Description copied from interface: CheckerRunner

Adds a PropertyChangeListener that will receive all the PropertyChangeEvent fired by this class

Specified by:

addPropertyChangeListener in interface CheckerRunner

Parameters:

changeListener - a PropertyChangeListener instance

addPropertyChangeListener

public void addPropertyChangeListener(java.lang.String propertyName,
                                      java.beans.PropertyChangeListener listener)

Deprecated.

Description copied from interface: CheckerRunner

Adds a PropertyChangeListener that will receive the PropertyChangeEvent fired when the property with the given name is changed

Specified by:

addPropertyChangeListener in interface CheckerRunner

Parameters:

propertyName - the name of the property to be listened

listener - a PropertyChangeListener instance

getCheckerConfiguration

public java.util.List<StructureChecker> getCheckerConfiguration()

Deprecated.

Description copied from interface: CheckerRunner

Gets the list of available checkers

Specified by:

getCheckerConfiguration in interface CheckerRunner

Returns:

the list of available checkers

setIgnoreConfigurationErrors

public void setIgnoreConfigurationErrors(boolean ignore)

Deprecated.

Description copied from interface: CheckerRunner

Sets whether configuration errors should be ignored on execution.

Specified by:

setIgnoreConfigurationErrors in interface CheckerRunner

Parameters:

ignore - true if configuration errors should be ignored on execution