All Classes

AbbrevGroupRecognizer AbbreviatedGroupChecker AbsoluteStereoFixer AbstractMRecordReader AbstractStructureChecker AbstractStructureFixer AdvancedCheckerRunner AliasChecker Alignment AlignmentAccuracyMode AlignmentMolecule AlignmentMoleculeFactory AlignmentMoleculeFactory.ProgressBarInterface AlignmentPlugin AlignmentProperties AlignmentProperties.ColoringScheme AlignmentProperties.ColorNotSpecifiedCase AlignmentProperties.NodeType AlignmentProperties.OrientationType AlignOnPairedAtoms AlignRigidEasy AngleMonitor AromaticityCheckerResult AromaticityErrorChecker ArrayMDocSource AsyncCallback AtomChecker AtomContext AtomMapChecker AtomProperty AtomQueryPropertyChecker AtomValueChecker AtropIsomerDetector AtropIsomerDetector.Accuracy AttachedDataChecker AutoMapper Base64Recognizer BasicCheckerRunner BondAngleChecker BondChecker BondLengthChecker BoundingBox CalculatorPlugin CalculatorPlugin.HydrogenData CalculatorPluginDisplay CalculatorPluginOutput Cancelable CEdge CellOrComponentId CGraph ChargePlugin CheckerRunner CheckerRunnerImpl ChemContext ChemJEP ChimeRecognizer Cleaner CleanFixer CleanUtil ClipboardHandler ClipboardHandler CNode CodeAssistFactory CodeAssistFactory.CodeAssistConfiguration ColorGenerator ComponentChecker ComponentElement CompositeInputProducer CompositeWorkUnit CompositeWorkUnitFactory ConcurrentProcessor ConcurrentProcessors ConfigurationReader ConformerPlugin ContractGroupFixer Control ConvertAliasToGroupFixer ConvertPseudoToGroupFixer ConvertToAtomFixer ConvertToCarbonFixer CoordinationSystemErrorChecker CopyOptConstants CrossedDoubleBondChecker CrossedDoubleBondFixer CTransform3D CubeRecognizer DataSgroup DefaultPluginWorkUnit DefaultStructureCheckerResult DihedralControl DihedralMonitor DihedralRotator DipoleCalculator DipoleCalculator.Builder DipoleResult DipoleResult.Unit DispOptConsts DistanceMonitor DocumentExtractor DocumentExtractor.ProgressInfo DocumentExtractor.ProgressListener DocumentToStructure DotfileUtil DoubleBondStereoErrorChecker DPoint3 DynamicArgument ElementalAnalyser ElementalAnalyserPlugin EnumerationPlugin ErrorProcessor Evaluator Expandable ExpandGroupFixer ExplicitHydrogenResult ExternalStructureChecker ExternalStructureCheckerResult FingerprintGenerator Fixes FixesExternal GeometryPlugin GlobalLocationControl GlobalOrientationControl GraphicCell GraphicComponent GraphicScene HBDAPlugin HitColoringAndAlignmentOptions HitDisplayUtil HTMLUtil HTTPServiceDescriptor HuckelAnalysisPlugin HybridizationStateConsts Hydrogenize ImageExportUtil Incomplecule InputProducer IonChargePlugin IsoelectricPointPlugin IsotopeChecker IsotopeFixer IteratorFactory IUPACNamingPlugin JsonServiceDescriptor JsonServiceDescriptor.Method JTFRecognizer Label LicenseManager LocalLocationControl LocalOrientationControl LocalServiceDescriptor logDPlugin logPPlugin MacroMoleculeComponent MacroMoleculeComponent.MoleculeVisualizer MajorMicrospeciesAccessorPlugin MajorMicrospeciesPlugin MapMoleculeFixer MapReactionFixer MarkushEnumerationPlugin MarvinPane MarvinPaneBeanInfo MarvinTransferable MAtomSetPoint MBooleanProp MBracket MChemicalStruct MCollectionProp MdlCompressor MDocSource MDocStorage MDocStorage.Listener MDocument MDocument.CheckerMark MDoubleArrayProp MDoubleProp MeasurementMonitor MEFlow MEFlowBasePoint MEllipse MetalloceneErrorChecker MetalloceneFixer MFieldAccessor MFileFormat MFileFormatUtil MFont MHashProp MHCoords3DProp MinMaxDistance MIntegerArrayProp MIntegerProp MissingAtomMapChecker MListProp MMidPoint MMidPoint.Sticky MMoleculeProp MObject MObjectProp MolAligner MolAtom MolBond MolCondition MolContext MolConverter MolConverter.Builder MolConverter.Options MolecularDynamicsPlugin MolecularSurfaceComponent Molecule MoleculeChargeChecker MoleculeComponent MoleculeGraph MoleculeGraph.ValenceCheckState MoleculeIterator MoleculeIteratorFactory MoleculeUtil MolExport MolExporter MolExportException MolExportException MolExportModule MolExportModule MolfileUtil MolFilter MolFormatException MolFragLoader MolFragLoader.RgroupAttachmentCountFilter MolImageSize MolImport MolImporter MolImportModule MolImportModule.PreferredView MolInputProducer MolInputStream MolPrinter MolRenderer Monitor MPoint MPolyline MProp MPropertyContainer MPropHandler MRecord MRecordImporter MRecordParseException MRecordReader MRecordReader.Position MRectangle MRectanglePoint MRectanglePoint.Sticky MRoundedRectangle MSAPlugin MSelectionDocument MSketch MSketchPane MSketchPaneBeanInfo MSpaceEasy MStringProp MTextAttributes MTextBox MTextDocument MTextDocument.Section MTransferable MTransformable MultiCenterChecker MultipleSgroup MView MViewEditor MViewPane MViewPaneBeanInfo MViewParams MViewRenderer NameConverter NameConverters NameFormatException NameFormatException.FilteredCase NamePrefixException NMRCalculator NMRCalculator.Builder NMRSpectrum NMRSpectrum.Nucleus NMRSpectrum.Unit OptionDescriptor OptionsPane OrbitalElectronegativityPlugin OverlappingAtomsChecker OverlappingBondsChecker PairwiseAlignment PairwiseComparison PairwiseSimilarity3D ParameterConstants ParameterPanel ParameterPanelHandler ParameterTab PartialCleanFixer PDBRecognizer PeptideRecognizer PeriodicSystem Pharmacophore3D PharmacophoreArrow PharmacophorePoint pKaPlugin PluginException PluginExecutionException PluginFactory PluginWorkUnit PolarizabilityPlugin PositionedInputStream PositionMonitor PredictorPlugin PseudoAtomChecker QueryAtomChecker QueryBond QueryBondChecker RadicalChecker RatomChecker ReactionChecker ReactionContext ReactionMapErrorChecker RearomatizeFixer Recognizer RecognizerList RefractivityPlugin RemoveAtomFixer RemoveAtomMapFixer RemoveAtomValueFixer RemoveAttachedDataFixer RemoveBondFixer RemoveRadicalFixer RepeatingUnitSgroup ResizeControl ResonancePlugin ReusableInputProducer ReusablePluginWorkUnit RgMolecule RgroupAttachmentErrorChecker RgroupReferenceErrorChecker RingStrainErrorChecker RotatableBondDetector RxnMolecule SearchContext SelectionMolecule ServiceArgument ServiceDescriptorEditor ServiceDescriptorEditorProvider ServiceDescriptorReader ServiceDescriptorTools ServiceDescriptorWriter ServiceDialogProvider ServiceException ServiceHandler Sgroup SgroupAtom SgroupCheckerResult SketchCheckerRunner SketchParameterConstants SmartsAtomQuerifier SMILESRecognizer Smolecule SoapServiceDescriptor Standardizer Stereochemistry StereoConstants StereoisomerPlugin StructuralFrameworksPlugin StructuralFrameworksPlugin.FrameworkTypes StructuralFrameworksPlugin.VerbosePrinter StructureChecker StructureCheckerErrorType StructureCheckerResult StructureFixer StructureToJC4XL SuperatomSgroup SurfaceColoring SurfaceComponent SwingUtil TableOptions TableSupport TaskScheduler TautomerizationPlugin ThreeDimensionChecker TopologyAnalyser TopologyAnalyserPlugin TPSAPlugin TransferableDescriptor UnbalancedReactionChecker UngroupFixer UserSettings ValenceErrorChecker ValenceFixer ValencePropertyChecker VersionInfo ViewParameterConstants WedgeErrorChecker WigglyDoubleBondChecker WigglyDoubleBondFixer WorkUnit WorkUnitFactory WSmolecule XMLBasedConfigurationReader XMLRPCServiceDescriptor